I think ... - Ubuntuhttps://blog.kmonsoor.com/2021-03-31T00:00:00+06:00Pimping up My Linux Terminal2021-03-31T00:00:00+06:002021-03-31T00:00:00+06:00Khaled Monsoortag:blog.kmonsoor.com,2021-03-31:/pimp-up-my-terminal/<p>How do I pimp up my Linux terminal? A quick trip through Zsh, Oh-my-zsh, and other power tools to make the command-line-based workflow smooth and cool.</p><p>The purpose of this post is to be my quick, copy-paste source of the commands that I use to set up my terminal on a new *nix system.
However, if someone else finds it useful, that’d be some cherries on top.</p>
<p>This command prompt in the below image is the end goal.</p>
<p><img alt="The end goal of this post" src="https://i.imgur.com/oZahIog.png"></p>
<p>Assuming, I’m on a standard pc/server with Ubuntu Linux and I have <span class="caps">CLI</span> access with <code>sudo</code>. For other Linux distros or <em>MacOS</em>, some commands might be slightly different.</p>
<h2 id="step-1-confirm-that-zsh-is-up-to-date">Step-1: Confirm that Zsh is up-to-date<a class="headerlink" href="#step-1-confirm-that-zsh-is-up-to-date" title="Permanent link">¶</a></h2>
<p>While on most of the Linux systems Zsh is present by default, on others that’s not the case. So, let’s make sure about it.</p>
<div class="highlight"><pre><span></span><code><span class="linenos" data-linenos="1 "></span><span class="gp">$ </span>sudo apt install zsh
</code></pre></div>
<p>Confirm the version. <code>Oh-my-zsh</code> recommends Zsh to be <code>5.0.8</code> or higher.</p>
<div class="highlight"><pre><span></span><code><span class="linenos" data-linenos="1 "></span><span class="gp">$ </span>zsh --version
<span class="linenos" data-linenos="2 "></span><span class="go">zsh 5.8 (x86_64-ubuntu-linux-gnu)</span>
</code></pre></div>
<p>Also, you gotta make sure that <code>git</code> (recommended v2.4.11 or higher) is also installed on the system.</p>
<h2 id="step-2-install-oh-my-zsh-the-fun-configuration-framework">Step-2: Install Oh-my-zsh, the fun “configuration” framework<a class="headerlink" href="#step-2-install-oh-my-zsh-the-fun-configuration-framework" title="Permanent link">¶</a></h2>
<p>Install directly from the source.</p>
<div class="highlight"><pre><span></span><code><span class="linenos" data-linenos="1 "></span><span class="gp">$ </span>sh -c <span class="s2">"</span><span class="k">$(</span>curl -fsSL https://raw.github.com/ohmyzsh/ohmyzsh/master/tools/install.sh<span class="k">)</span><span class="s2">"</span>
</code></pre></div>
<p>In the last step of this installation, it will ask to set Zsh as <span class="caps">THE</span> shell. Go ahead.</p>
<p>Now we have the default prompt from <code>Oh-my-zsh</code>. </p>
<p><img alt="After successful installation of Oh-my-zsh" src="https://i.imgur.com/HOVqqvi.png"></p>
<p>Now, let’s pimp up the prompt. Shall we?</p>
<h2 id="step-3-install-powerlevel10k-a-powerful-prompt-theme">Step-3: Install <code>powerlevel10k</code>, a powerful prompt theme<a class="headerlink" href="#step-3-install-powerlevel10k-a-powerful-prompt-theme" title="Permanent link">¶</a></h2>
<p>I love the powerful Zsh theme <code>powerlevel10k</code>. More on <a href="https://github.com/romkatv/powerlevel10k#features">why this theme</a> is awesome.</p>
<p>Let’s install it on top of <code>oh-my-zsh</code>.</p>
<div class="highlight"><pre><span></span><code><span class="linenos" data-linenos="1 "></span><span class="gp">$ </span>git clone --depth<span class="o">=</span><span class="m">1</span> <span class="se">\</span>
<span class="linenos" data-linenos="2 "></span> https://github.com/romkatv/powerlevel10k.git <span class="se">\</span>
<span class="linenos" data-linenos="3 "></span><span class="gp"> $</span><span class="o">{</span>ZSH_CUSTOM:-<span class="nv">$HOME</span>/.oh-my-zsh/custom<span class="o">}</span>/themes/powerlevel10k
</code></pre></div>
<p>Now, gotta set <code>ZSH_THEME="powerlevel10k/powerlevel10k"</code> in <code>~/.zshrc</code> by adding that manually in the file.</p>
<h2 id="step-4-make-sure-the-prompt-looks-like-as-you-want">Step-4: Make sure the prompt looks like as you want<a class="headerlink" href="#step-4-make-sure-the-prompt-looks-like-as-you-want" title="Permanent link">¶</a></h2>
<p>In this step, I’m gonna bring in my already open-sourced Zsh config file aka <code>.zshrc</code>. </p>
<div class="highlight"><pre><span></span><code><span class="linenos" data-linenos="1 "></span><span class="gp"># </span>deleting the current one <span class="p">&</span> get my personal one from GitHub
<span class="linenos" data-linenos="2 "></span><span class="gp">$ </span>rm .zshrc
<span class="linenos" data-linenos="3 "></span><span class="gp">$</span>
<span class="linenos" data-linenos="4 "></span><span class="gp">$ </span>wget https://raw.githubusercontent.com/kmonsoor/dot-files/master/.zshrc
</code></pre></div>
<p>I kept the powerlevel10k configs as comments so that Zsh doesn’t complain if I use the config file early.
Have to set <code>ZSH_THEME="powerlevel10k/powerlevel10k"</code> in the <code>~/.zshrc</code> as well.</p>
<p>Otherwise, once the <code>powerlevel10k</code> theme will run for the first time by Zsh, a very friendly step-by-step prompt will run you through towards a desirable prompt for you. Also, whenever you want, you can invoke the config-wizard by executing <code>p10k configure</code> on the shell.</p>
<p>Now is the time to enable the changes by restarting Zsh and enjoy the new config and the powerful prompt.</p>
<div class="highlight"><pre><span></span><code><span class="linenos" data-linenos="1 "></span><span class="gp">$ </span><span class="nb">exec</span> zsh
</code></pre></div>
<h2 id="optional">Optional<a class="headerlink" href="#optional" title="Permanent link">¶</a></h2>
<p>Also, I usually install this very useful, but external plugin <code>zsh-syntax-highlighting</code> for oh-my-zsh.</p>
<p><div class="highlight"><pre><span></span><code><span class="linenos" data-linenos="1 "></span><span class="gp">$ </span>git clone https://github.com/zsh-users/zsh-syntax-highlighting.git <span class="si">${</span><span class="nv">ZSH_CUSTOM</span><span class="k">:-</span><span class="p">~/.oh-my-zsh/custom</span><span class="si">}</span>/plugins/zsh-syntax-highlighting
</code></pre></div>
Don’t forget to activate the plugin by including it in ~/.zshrc. For that, add <code>zsh-syntax-highlighting</code> inside the list of other plugins.</p>
<p>plugins=( plugin_a plugin_b zsh-syntax-highlighting)</p>Ubuntu - Update APT-GET Server to Use Fastest Mirror2016-10-10T00:00:00+06:002016-10-10T00:00:00+06:00Khaled Monsoortag:blog.kmonsoor.com,2016-10-10:/ubuntu-update-apt-get-server-to-use-fastest-mirror/<p>Updating Ubuntu from it’s default server takes too damn long. Give it a 10x boost.</p><h2 id="prelude">Prelude<a class="headerlink" href="#prelude" title="Permanent link">¶</a></h2>
<p>By default, Ubuntu sets the update server pointing to its own (<a href="http://archive.ubuntu.com">http://archive.ubuntu.com</a>). It is the safest bet for Ubuntu. But, that’s not the case for users, especially who are outside <span class="caps">USA</span>. To make it smoother as well as distribute the load, Ubuntu also provides a list of mirror sites. You can find the official mirror list <a href="https://launchpad.net/ubuntu/+archivemirrors">here</a>. </p>
<p>However, it needs some configuration.</p>
<h2 id="on-gui">On <span class="caps">GUI</span><a class="headerlink" href="#on-gui" title="Permanent link">¶</a></h2>
<p>Yes, you can do the selection on Ubuntu using its <span class="caps">GUI</span> tool. But, the problem is it don’t always work as you want.</p>
<blockquote>
<p>It works on geolocation, giving me the local server, which is waaaayy slower where I am. The network temporal distance is the important factor here, not spatial distance (<a href="http://askubuntu.com/a/9035/113604">http://askubuntu.com/a/9035/113604</a>)</p>
</blockquote>
<p><img alt="Ubuntu-select-update-server-GUI" src="http://i.imgur.com/sCWr0zrl.png"></p>
<h2 id="so-what-else-do-we-have">so, what else do we have ?<a class="headerlink" href="#so-what-else-do-we-have" title="Permanent link">¶</a></h2>
<p>I use a handy tool for this purpose to point me to the fastest server <span class="caps">FOR</span> <span class="caps">ME</span>. It’s <a href="https://github.com/jblakeman/apt-select">apt-select</a>.</p>
<p>To install it, i found this method most hassle-free. You may also try <code>pip install</code> method described on the repo’s <span class="caps">README</span> file.</p>
<div class="highlight"><pre><span></span><code><span class="linenos" data-linenos="1 "></span><span class="gp">$ </span>git clone https://github.com/jblakeman/apt-select.git
</code></pre></div>
<p>That’s it. Now to execute it, just run the “main” Python file.</p>
<div class="highlight"><pre><span></span><code><span class="linenos" data-linenos="1 "></span><span class="gp">$ </span><span class="nb">cd</span> apt-select
<span class="hll"><span class="linenos" data-linenos="2 "></span><span class="gp">$ </span>./apt-select.py -c -t <span class="m">3</span> -m one-week-behind
</span></code></pre></div>
<p>We are choosing here the best 3 mirrors(due to <code>-t 3</code>) which are at most <code>one week behind</code> from the main Ubuntu server. For general purposes, that’s good enough.</p>
<p>It will choose one using the latency <span class="amp">&</span> ping time, and also show servers’ bandwidth. Then the tool asks you to select new mirror from the <code>3</code> options came up. Usually, stick to the top option, hence <code>1</code>.
For example in my case, it shows:</p>
<div class="highlight"><pre><span></span><code><span class="hll"><span class="linenos" data-linenos=" 1 "></span><span class="gp">[khaled:~] $ </span>apt-select -c -t <span class="m">3</span> -m one-week-behind
</span><span class="linenos" data-linenos=" 2 "></span><span class="go">Getting list of mirrors...done.</span>
<span class="linenos" data-linenos=" 3 "></span><span class="go">Testing latency to mirror(s)</span>
<span class="linenos" data-linenos=" 4 "></span><span class="go">[3/3] 100%</span>
<span class="linenos" data-linenos=" 5 "></span><span class="go">Getting list of launchpad URLs...done.</span>
<span class="linenos" data-linenos=" 6 "></span><span class="go">Looking up 3 status(es)</span>
<span class="linenos" data-linenos=" 7 "></span><span class="go">[3/3] 100%</span>
<span class="linenos" data-linenos=" 8 "></span><span class="go">1. mirror.dhakacom.com (current)</span>
<span class="linenos" data-linenos=" 9 "></span><span class="go"> Latency: 1.89 ms</span>
<span class="linenos" data-linenos="10 "></span><span class="go"> Org: dhakaCom Limited</span>
<span class="linenos" data-linenos="11 "></span><span class="go"> Status: Up to date</span>
<span class="linenos" data-linenos="12 "></span><span class="go"> Speed: 1 Gbps</span>
<span class="linenos" data-linenos="13 "></span><span class="go">2. mirror.dhakacom.com</span>
<span class="linenos" data-linenos="14 "></span><span class="go"> Latency: 1.96 ms</span>
<span class="linenos" data-linenos="15 "></span><span class="go"> Org: dhakaCom Limited</span>
<span class="linenos" data-linenos="16 "></span><span class="go"> Status: Up to date</span>
<span class="linenos" data-linenos="17 "></span><span class="go"> Speed: 1 Gbps</span>
<span class="linenos" data-linenos="18 "></span><span class="go">3. archive.ubuntu.com</span>
<span class="linenos" data-linenos="19 "></span><span class="go"> Latency: 205.23 ms</span>
<span class="linenos" data-linenos="20 "></span><span class="go"> Org: Canonical Ltd.</span>
<span class="linenos" data-linenos="21 "></span><span class="go"> Status: Up to date</span>
<span class="linenos" data-linenos="22 "></span><span class="go"> Speed: 100 Mbps</span>
<span class="linenos" data-linenos="23 "></span><span class="go">Choose a mirror (1 - 3)</span>
<span class="linenos" data-linenos="24 "></span><span class="go">'q' to quit 1</span>
<span class="linenos" data-linenos="25 "></span><span class="go">New config file saved to /home/khaled/sources.list</span>
</code></pre></div>
<p>Then, the tool prepares a new <code>sources.list</code> file to replace the system’s one with.</p>
<p>Now, replace the file with the new one which will be now used by the <code>apt-get *</code> commands. As it overwrites a system config file, you need to do with <code>sudo</code>.</p>
<div class="highlight"><pre><span></span><code><span class="linenos" data-linenos="1 "></span><span class="gp">$ </span>sudo mv /etc/apt/sources.list /etc/apt/sources.list.backup <span class="o">&&</span> sudo mv sources.list /etc/apt/
</code></pre></div>
<p>That’s it. Now, all you update/upgrade will be fetched from the newly selected mirror.</p>
<p>However, I highly recommend to run <code>update</code> once right away.</p>
<div class="highlight"><pre><span></span><code><span class="linenos" data-linenos="1 "></span><span class="gp">$ </span>sudo apt-get update
</code></pre></div>
<p>Then, only if you want, run <code>upgrade</code>:</p>
<div class="highlight"><pre><span></span><code><span class="linenos" data-linenos="1 "></span><span class="gp">$ </span>sudo apt-get upgrade
</code></pre></div>
<hr>
<h2 id="you-may-also-like">You may also like<a class="headerlink" href="#you-may-also-like" title="Permanent link">¶</a></h2>
<ul>
<li><a href="https://blog.kmonsoor.com/open-source-as-if-you-gonna-die-tonight/?utm_source=related_footer&utm_keyword=coding">Open Source as-if You Gonna Die Tonight</a></li>
<li><a href="https://blog.kmonsoor.com/pelican-how-to-make-seo-friendly/?utm_source=related_footer&utm_keyword=python">Pelican Static sites - <span class="caps">SEO</span> Optimization</a></li>
<li><a href="https://blog.kmonsoor.com/generate-er-diagram-from-sql-database/?utm_source=related_footer&utm_keyword=coding">Generate <span class="caps">ER</span> diagram from a <span class="caps">SQL</span>-based database</a></li>
</ul>Increase virtual-disk size in VirtualBox on Windows 72012-05-26T08:02:00+06:002012-05-26T08:02:00+06:00Khaled Monsoortag:blog.kmonsoor.com,2012-05-26:/increase-virtual-disk-size-in-virtualbox-windows/<p>Stuck with your small virtual disk partition for VirtualBox? I also stuck with same problem; researched many forums, and here is the gist. Find out how.</p><p>Are you stuck with your small virtual disk partition for VirtualBox? You created the partition for some testing <span class="amp">&</span> practicing, now it needs more space. I was also stuck with the same problem; so I researched many forums, and here is the gist.</p>
<p>[Note: This procedure won’t work for <span class="caps">VM</span> with snapshots. So, please take note the fact about your system beforehand.]</p>
<ul>
<li>Download <a href="http://gparted.org/download.php">Gparted</a>, disk manager for Linux. It’ll come as an <span class="caps">ISO</span> file.</li>
<li>Boot into your guest <span class="caps">OS</span>, check, with df command, which partition you need to grow. Take note of that specific mounted <span class="caps">HD</span>, such as /dev/hdb/sda3</li>
<li>Take backup of your existing data, as I <span class="caps">WILL</span> <span class="caps">NOT</span> <span class="caps">TAKE</span> <span class="caps">ANY</span> <span class="caps">RESPONSIBILITY</span> <span class="caps">IF</span> <span class="caps">YOU</span> <span class="caps">DAMAGE</span> <span class="caps">YOUR</span> <span class="caps">DATA</span>.</li>
<li>In host <span class="caps">OS</span>, Goto the command prompt by running, cmd.exe</li>
<li>Navigate to the Virtualbox installation folder</li>
<li>Execute the command:</li>
</ul>
<div class="highlight"><pre><span></span><code><span class="linenos" data-linenos="1 "></span><span class="go">C:\ VBoxManage modifyhd X:\yourVM_DiskPath_InHost\yourVM_Disk.vdi --resize 40960</span>
</code></pre></div>
<p>you will see progress as below:</p>
<p><img alt="10% ... 20% .. .. 100%" src="http://i.imgur.com/iYORelg.png"></p>
<p>If you fail with a message like thid</p>
<blockquote>
<p><span class="dquo">“</span>VBoxManage.exe: error: Resize hard disk operation for this format is not implemented yet!”</p>
</blockquote>
<p>Now, you need this tool <a href="https://forums.virtualbox.org/download/file.php?id=7579">CloneVDI.exe</a> from this VirtualBox forum-post. If you’re using this tool, remember to check “Increase virtual drive size to ” with your desired size.</p>
<p><img alt="VDI_tool" src="http://i.imgur.com/YB49ZVk.png"></p>
<ul>
<li>Now, Load the <span class="caps">ISO</span> file to the <span class="caps">CD</span>/<span class="caps">DVD</span> drive of your virtual Linux.</li>
</ul>
<p><img alt="GParted.iso loaded on IDE Primary Master" src="http://i.imgur.com/UKyPkl8.png"></p>
<ul>
<li>Boot the Guest <span class="caps">OS</span>; from the boot menu, select <span class="caps">CD</span>/<span class="caps">DVD</span> drive, then it will boot in GParted tiny <span class="caps">OS</span>. Now the PartitionManager tool will come up automatically, like below:</li>
</ul>
<p><img alt="Gparted partition-manager" src="http://i.imgur.com/aK9kAtK.jpg"></p>
<ul>
<li>Now “shrink/Grow” or “Move” your desired partition, but be careful. Don’t rename any of them. Be careful about your data.</li>
<li>Don’t worry, unless you clicked Apply, nothing has actually took place. When you are done with moving and resizing, you have to click <strong><code>Apply</code></strong> to commit the change</li>
</ul>
<p><img alt="just before applying" src="http://i.imgur.com/wUMCHVQ.jpg"></p>
<ul>
<li>Once completed, close Gparted, and then shutdown the <span class="caps">OS</span></li>
<li>Unload the <span class="caps">ISO</span> aka virtual <span class="caps">CD</span> from virtual <span class="caps">OS</span></li>
<li>Boot into the virtual <span class="caps">OS</span> again</li>
<li>Now, check that if the desired partition grew or not by using the <code>df</code> command</li>
</ul>
<p>Thanks for visiting my blog. If it just helped you, please feel free to “Like” or “share”. Also, your suggestion or comment would be great as well.</p>
<hr>
<p>If you find this post helpful, you can show your support <a href="https://www.patreon.com/kmonsoor">through Patreon</a> or <a href="https://paypal.me/KhaledMonsoor/">Paypal</a> or by <a href="https://ko-fi.com/kmonsoor">buying me a coffee</a>. <em>Thanks!</em></p>How to install and use `UNAFold` / `mfold` RPM package on Ubuntu2011-02-17T00:00:00+06:002011-02-17T00:00:00+06:00Khaled Monsoortag:blog.kmonsoor.com,2011-02-17:/install-and-use-unafold-mfold-rpm-package-in-ubuntu/<p>I failed to install UNAFold/mfold in Ubuntu 10.10 as the supplied binary package was in rpm (RedHat) format. How to solve it?</p><p>[Please note that this post has been written quite a while ago. After that, it hasn’t been updated much.]</p>
<p>I failed to install UNAFold/mfold in Ubuntu 10.10 as the supplied binary package was in rpm (RedHat) format.</p>
<p><code>Ubuntu 10.10</code> can’t use rpm files to install software directly.</p>
<p>After doing some digging, I found that it is possible to convert rpm files to deb(Debian) format by using another app, named <code>alien</code>.</p>
<p>But <code>alien</code> isn’t installed on Ubuntu by default. So I used the command,</p>
<div class="highlight"><pre><span></span><code><span class="linenos" data-linenos="1 "></span><span class="gp">$ </span>sudo apt-get install alien
</code></pre></div>
<p>then check the installation:</p>
<div class="highlight"><pre><span></span><code><span class="linenos" data-linenos="1 "></span><span class="gp">$ </span>alien
</code></pre></div>
<p>if it goes okay, now to simply convert the UNAFold package:</p>
<div class="highlight"><pre><span></span><code><span class="linenos" data-linenos="1 "></span><span class="gp">$</span>sudo alien ~/Downloads/unafold-3.8-1.i386.rpm
</code></pre></div>
<p>the converted one is named like <code>unafold_3.8-2_i386.deb</code></p>
<p>Now use this new package for installation</p>
<div class="highlight"><pre><span></span><code><span class="linenos" data-linenos="1 "></span><span class="gp">$ </span>sudo dpkg -i unafold_3.8-2_i386.deb
</code></pre></div>
<p>after installation, you should be able to run the *.pl scripts with appropriate input, like:</p>
<div class="highlight"><pre><span></span><code><span class="linenos" data-linenos="1 "></span><span class="gp">$ </span>perl /usr/bin/UNAFold.pl ~/s1.seq
</code></pre></div>